Index: /CKEditor/branches/features/adobeair/_source/plugins/wysiwygarea/plugin.js
===================================================================
--- /CKEditor/branches/features/adobeair/_source/plugins/wysiwygarea/plugin.js	(revision 6065)
+++ /CKEditor/branches/features/adobeair/_source/plugins/wysiwygarea/plugin.js	(revision 6066)
@@ -975,6 +975,7 @@
 								else if ( !CKEDITOR.env.opera && editor.window )
 								{
-									editor.window.focus();
-
+									var win = editor.window;
+									// AIR need a while when focus was switching previously  from a link.
+									CKEDITOR.env.air? setTimeout( function () { win.focus(); }, 0 ) : win.focus();
 									editor.selectionChange();
 								}